STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106759889Transcription factor bHLH35. (245 aa)    
Predicted Functional Partners:
LOC106762056
Niemann-Pick C1 protein isoform X1.
   
 0.865
LOC106764758
Niemann-Pick C1 protein.
   
 0.865
LOC106768308
Uncharacterized protein LOC106768308.
   
 0.865
LOC106766237
Niemann-Pick C1 protein-like.
   
 0.865
LOC106768505
Importin subunit beta-1.
    
 0.839
LOC106775805
Importin subunit beta-1.
    
 0.839
LOC106775922
Membrane metalloprotease ARASP, chloroplastic.
    
 0.716
LOC106777131
Probable zinc metallopeptidase EGY3, chloroplastic.
    
 0.716
LOC106765870
Membrane-bound transcription factor site-2 protease homolog isoform X1.
    
 0.716
LOC106765679
Transcription factor MYB44.
      
 0.704
Your Current Organism:
Vigna radiata
NCBI taxonomy Id: 3916
Other names: Phaseolus aureus, Phaseolus aureus Roxb., Phaseolus radiatus, Phaseolus radiatus L., V. radiata var. radiata, Vigna radiata var. radiata, golden gram, green gram, mung bean
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.