STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106760373Transcription factor TGA2.3-like. (160 aa)    
Predicted Functional Partners:
LOC106754116
Autophagy-related protein.
      
 0.820
LOC106754845
Autophagy-related protein.
      
 0.820
LOC106755334
Vesicle transport v-SNARE 12.
      
 0.820
LOC106766790
Autophagy-related protein.
      
 0.820
LOC106769202
Autophagy-related protein.
      
 0.820
LOC106775117
Autophagy-related protein.
      
 0.820
LOC106755340
Uncharacterized protein At1g04910-like isoform X1.
  
     0.497
LOC106766682
Uncharacterized protein At1g04910-like.
  
     0.487
LOC106752624
Cell division control protein 2 homolog C; Belongs to the protein kinase superfamily.
      
 0.482
LOC106763950
Cell division control protein 2 homolog D; Belongs to the protein kinase superfamily.
      
 0.482
Your Current Organism:
Vigna radiata
NCBI taxonomy Id: 3916
Other names: Phaseolus aureus, Phaseolus aureus Roxb., Phaseolus radiatus, Phaseolus radiatus L., V. radiata var. radiata, Vigna radiata var. radiata, golden gram, green gram, mung bean
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.