STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106760801Branched-chain-amino-acid aminotransferase; Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family. (426 aa)    
Predicted Functional Partners:
LOC106776052
Dihydroxy-acid dehydratase, chloroplastic.
  
 0.986
LOC106754885
2-oxoisovalerate dehydrogenase subunit beta 1, mitochondrial.
  
 0.962
LOC106754716
2-oxoisovalerate dehydrogenase subunit alpha 2, mitochondrial isoform X1.
  
 
 0.959
LOC106778836
2-oxoisovalerate dehydrogenase subunit alpha 2, mitochondrial.
  
 
 0.959
LOC106772130
2-isopropylmalate synthase 1, chloroplastic.
  
 0.950
LOC106753721
Probable 2-isopropylmalate synthase; Belongs to the alpha-IPM synthase/homocitrate synthase family.
  
 0.950
LOC106758343
Probable 2-isopropylmalate synthase; Belongs to the alpha-IPM synthase/homocitrate synthase family.
  
 0.950
LOC106773174
3-methyl-2-oxobutanoate hydroxymethyltransferase; Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha- ketoisovalerate to form ketopantoate.
    
 0.938
LOC106758593
Alanine--glyoxylate aminotransferase 2 homolog 3, mitochondrial; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
   
 
 0.933
LOC106767849
Alanine--glyoxylate aminotransferase 2 homolog 1, mitochondrial isoform X1; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
   
 
 0.933
Your Current Organism:
Vigna radiata
NCBI taxonomy Id: 3916
Other names: Phaseolus aureus, Phaseolus aureus Roxb., Phaseolus radiatus, Phaseolus radiatus L., V. radiata var. radiata, Vigna radiata var. radiata, golden gram, green gram, mung bean
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