STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106763796Transcription factor bHLH52-like. (280 aa)    
Predicted Functional Partners:
LOC106780619
Transcription factor TCP4.
  
     0.530
LOC106766420
Ninja-family protein 2-like isoform X1.
  
     0.517
LOC106755913
Ninja-family protein 2 isoform X1.
  
     0.516
LOC106753224
NAC domain-containing protein 92-like.
  
     0.512
LOC106759129
Zinc finger protein ZAT6-like isoform X1.
  
     0.511
LOC106752614
Exocyst subunit Exo70 family protein; Component of the exocyst complex.
  
     0.508
LOC106778163
NAC domain-containing protein 96-like.
  
     0.505
LOC106779251
Protein LATERAL ROOT PRIMORDIUM 1.
  
     0.504
LOC106765164
Protein NTM1-like 9 isoform X1.
  
     0.503
LOC106778148
Protein CUP-SHAPED COTYLEDON 3 isoform X1.
  
     0.499
Your Current Organism:
Vigna radiata
NCBI taxonomy Id: 3916
Other names: Phaseolus aureus, Phaseolus aureus Roxb., Phaseolus radiatus, Phaseolus radiatus L., V. radiata var. radiata, Vigna radiata var. radiata, golden gram, green gram, mung bean
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.