STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106764184Polygalacturonase 1 beta-like protein 2. (616 aa)    
Predicted Functional Partners:
LOC106771343
Uncharacterized protein LOC106771343.
  
     0.523
LOC106754923
Uncharacterized protein LOC106754923.
  
     0.517
LOC106759216
Probable non-specific lipid-transfer protein AKCS9.
  
     0.515
LOC106755778
Uncharacterized protein LOC106755778.
  
     0.514
LOC106755599
Heavy metal-associated isoprenylated plant protein 26.
  
     0.513
LOC111240799
Probable pectate lyase 1.
  
   0.513
LOC106755383
Uncharacterized protein LOC106755383.
  
     0.511
LOC106766933
Uncharacterized protein LOC106766933 isoform X1.
  
     0.510
LOC106768944
SKP1-interacting partner 15.
  
     0.508
LOC106754448
Non-specific lipid-transfer protein; Plant non-specific lipid-transfer proteins transfer phospholipids as well as galactolipids across membranes. May play a role in wax or cutin deposition in the cell walls of expanding epidermal cells and certain secretory tissues.
  
     0.506
Your Current Organism:
Vigna radiata
NCBI taxonomy Id: 3916
Other names: Phaseolus aureus, Phaseolus aureus Roxb., Phaseolus radiatus, Phaseolus radiatus L., V. radiata var. radiata, Vigna radiata var. radiata, golden gram, green gram, mung bean
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