STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106765200PHD finger protein ALFIN-LIKE 4. (251 aa)    
Predicted Functional Partners:
LOC106756634
Protein TRAUCO.
   
 
 0.695
LOC106775004
Multiple organellar RNA editing factor 1, mitochondrial.
    
 
 0.678
LOC106777838
Zinc finger CCCH domain-containing protein 44 isoform X1.
    
 
 0.620
LOC106754038
Uncharacterized protein LOC106754038.
    
 
 0.615
LOC106775779
Uncharacterized protein At5g08430.
    
 
 0.615
LOC106769518
Protein RBL isoform X1.
    
 
 0.614
LOC106764821
Protein RBL isoform X1.
    
 
 0.614
LOC106762959
Protein ANTHESIS POMOTING FACTOR 1.
    
 
 0.483
LOC106766151
Protein ANTHESIS POMOTING FACTOR 1-like.
    
 
 0.483
LOC106780281
Protein ANTHESIS POMOTING FACTOR 1 isoform X1.
    
 
 0.483
Your Current Organism:
Vigna radiata
NCBI taxonomy Id: 3916
Other names: Phaseolus aureus, Phaseolus aureus Roxb., Phaseolus radiatus, Phaseolus radiatus L., V. radiata var. radiata, Vigna radiata var. radiata, golden gram, green gram, mung bean
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.