STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106767744UPF0481 protein At3g47200. (471 aa)    
Predicted Functional Partners:
LOC106771388
Uncharacterized protein LOC106771388.
  
     0.523
LOC106768576
Uncharacterized protein LOC106768576.
  
 
   0.518
LOC106761653
Uncharacterized protein LOC106761653.
  
 
   0.516
LOC106769631
Uncharacterized protein LOC106769631.
  
     0.516
LOC106769761
Uncharacterized protein LOC106769761.
  
     0.514
LOC106771360
Probable membrane-associated kinase regulator 5.
  
     0.507
LOC111241486
Probable disease resistance protein At1g12280.
  
     0.501
LOC106767076
Uncharacterized protein LOC106767076.
  
  
  0.500
LOC106768081
Uncharacterized protein LOC106768081.
  
     0.494
LOC106764190
Uncharacterized protein LOC106764190.
  
     0.490
Your Current Organism:
Vigna radiata
NCBI taxonomy Id: 3916
Other names: Phaseolus aureus, Phaseolus aureus Roxb., Phaseolus radiatus, Phaseolus radiatus L., V. radiata var. radiata, Vigna radiata var. radiata, golden gram, green gram, mung bean
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.