STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106767941Uncharacterized protein LOC106767941. (100 aa)    
Predicted Functional Partners:
LOC106754749
Uncharacterized protein LOC106754749.
  
     0.542
LOC106775689
Multiple organellar RNA editing factor 9, chloroplastic.
  
     0.536
LOC106753913
Protein ROOT PRIMORDIUM DEFECTIVE 1.
  
     0.534
LOC106773018
Uncharacterized protein LOC106773018.
  
     0.524
LOC106771698
Uncharacterized protein LOC106771698.
  
     0.507
LOC106765833
Uncharacterized protein LOC106765833 isoform X1.
  
     0.506
LOC106774058
RAP domain-containing protein, chloroplastic.
  
     0.502
LOC106779417
Pentatricopeptide repeat-containing protein At2g15820, chloroplastic.
  
     0.500
LOC106766434
Uncharacterized protein LOC106766434.
  
     0.499
LOC106758552
CRM-domain containing factor CFM2, chloroplastic isoform X1.
  
     0.496
Your Current Organism:
Vigna radiata
NCBI taxonomy Id: 3916
Other names: Phaseolus aureus, Phaseolus aureus Roxb., Phaseolus radiatus, Phaseolus radiatus L., V. radiata var. radiata, Vigna radiata var. radiata, golden gram, green gram, mung bean
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.