STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC10676816826S proteasome regulatory subunit RPN13. (320 aa)    
Predicted Functional Partners:
LOC106775924
26S proteasome regulatory subunit 6B homolog; Belongs to the AAA ATPase family.
   
 0.998
LOC106778198
26S proteasome regulatory subunit 7; Belongs to the AAA ATPase family.
   
 0.996
LOC106752885
26S proteasome non-ATPase regulatory subunit 8 homolog A.
   
 0.995
LOC106756281
26S proteasome non-ATPase regulatory subunit 2 homolog; Acts as a regulatory subunit of the 26 proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.
   
 0.995
LOC106756754
26S proteasome non-ATPase regulatory subunit 7 homolog A.
   
 0.995
LOC106769512
26S proteasome non-ATPase regulatory subunit 6 homolog.
   
 0.995
LOC106770706
26S proteasome non-ATPase regulatory subunit 1 homolog; Acts as a regulatory subunit of the 26S proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.
   
 0.995
LOC106772638
26S proteasome regulatory subunit 6A homolog; Belongs to the AAA ATPase family.
   
 0.995
LOC106773956
26S proteasome regulatory subunit 8 homolog A; Belongs to the AAA ATPase family.
   
 0.995
LOC106757879
26S proteasome regulatory subunit 4 homolog A; Belongs to the AAA ATPase family.
   
 0.993
Your Current Organism:
Vigna radiata
NCBI taxonomy Id: 3916
Other names: Phaseolus aureus, Phaseolus aureus Roxb., Phaseolus radiatus, Phaseolus radiatus L., V. radiata var. radiata, Vigna radiata var. radiata, golden gram, green gram, mung bean
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.