STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106771526LOW QUALITY PROTEIN: adhesive plaque matrix protein-like. (382 aa)    
Predicted Functional Partners:
LOC106755580
Non-classical arabinogalactan protein 30.
   
  
 0.735
LOC106761784
Peroxidase; Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress.
   
  
 0.724
LOC106760051
Peroxidase; Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress.
   
  
 0.724
LOC106755826
Endoglucanase 5.
   
 0.581
LOC106758002
Pistil-specific extensin-like protein.
   
    0.515
LOC106771572
Transcription factor bHLH118.
  
     0.468
LOC106766565
Probable transcription repressor OFP9.
  
    0.466
LOC106760709
Pectinesterase; In the C-terminal section; belongs to the pectinesterase family.
   
 0.461
LOC106779518
Pectinesterase; In the C-terminal section; belongs to the pectinesterase family.
   
 0.461
LOC106757598
Uncharacterized protein LOC106757598 isoform X1.
  
     0.444
Your Current Organism:
Vigna radiata
NCBI taxonomy Id: 3916
Other names: Phaseolus aureus, Phaseolus aureus Roxb., Phaseolus radiatus, Phaseolus radiatus L., V. radiata var. radiata, Vigna radiata var. radiata, golden gram, green gram, mung bean
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.