STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106771876Probable inactive ATP-dependent zinc metalloprotease FTSHI 5, chloroplastic. (1284 aa)    
Predicted Functional Partners:
LOC106759253
Protein TIC 100.
  
  
 0.657
LOC106772524
Protein TIC 56, chloroplastic.
  
  
 0.641
LOC106753336
Prohibitin.
   
 0.585
LOC106760920
Prohibitin.
   
 0.585
LOC106761901
Prohibitin.
   
 0.585
LOC106754181
Prohibitin.
   
 0.582
LOC106779585
Prohibitin.
   
 0.582
LOC106774979
50S ribosomal protein L6, chloroplastic; Belongs to the universal ribosomal protein uL6 family.
   
 
 0.560
LOC106759626
50S ribosomal protein L5, chloroplastic.
   
   0.543
rps2
30S ribosomal protein S2, chloroplastic.
   
   0.537
Your Current Organism:
Vigna radiata
NCBI taxonomy Id: 3916
Other names: Phaseolus aureus, Phaseolus aureus Roxb., Phaseolus radiatus, Phaseolus radiatus L., V. radiata var. radiata, Vigna radiata var. radiata, golden gram, green gram, mung bean
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.