STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106772003ATP-dependent DNA helicase SRS2-like protein At4g25120. (1128 aa)    
Predicted Functional Partners:
LOC106775089
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
  
 
 0.931
LOC106762581
Crossover junction endonuclease MUS81 isoform X1.
    
 
 0.805
LOC106758811
DNA repair protein XRCC3 homolog.
  
 
 0.796
LOC106774933
DNA repair protein XRCC3 homolog.
  
 
 0.796
LOC106776193
ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily.
  
 
 0.785
LOC106776266
ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily.
  
 
 0.785
LOC106777687
DNA mismatch repair protein MLH3 isoform X1.
   
 
 0.757
LOC106762345
DNA mismatch repair protein MLH1 isoform X1.
   
 
 0.757
LOC106769770
DNA mismatch repair protein PMS1 isoform X1.
   
 
 0.757
LOC106771906
Serine/threonine-protein kinase ATR; Belongs to the PI3/PI4-kinase family.
    
 
 0.746
Your Current Organism:
Vigna radiata
NCBI taxonomy Id: 3916
Other names: Phaseolus aureus, Phaseolus aureus Roxb., Phaseolus radiatus, Phaseolus radiatus L., V. radiata var. radiata, Vigna radiata var. radiata, golden gram, green gram, mung bean
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.