STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106774071Protein SGT1 homolog B isoform X1. (359 aa)    
Predicted Functional Partners:
LOC106764678
Heat shock protein 90-6, mitochondrial.
    
 0.997
LOC106764799
Heat shock cognate protein 80.
   
 0.997
LOC106764918
Endoplasmin homolog.
    
 0.997
LOC106773454
Heat shock protein 83.
   
 0.997
LOC106777668
Heat shock protein 90-5, chloroplastic isoform X1.
    
 0.997
LOC106772275
Cysteine and histidine-rich domain-containing protein RAR1.
   
 0.992
LOC106768158
Uncharacterized protein LOC106768158.
    
 0.985
LOC106776377
Protein SGT1 homolog A.
  
 
0.907
LOC106778026
SKP1-like protein 1B; Belongs to the SKP1 family.
   
 
 0.762
LOC106759185
SKP1-like protein 21 isoform X1; Belongs to the SKP1 family.
   
 
 0.747
Your Current Organism:
Vigna radiata
NCBI taxonomy Id: 3916
Other names: Phaseolus aureus, Phaseolus aureus Roxb., Phaseolus radiatus, Phaseolus radiatus L., V. radiata var. radiata, Vigna radiata var. radiata, golden gram, green gram, mung bean
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.