STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106774713Probable LRR receptor-like serine/threonine-protein kinase At4g29180 isoform X1. (896 aa)    
Predicted Functional Partners:
LOC106771150
Senescence-associated carboxylesterase 101 isoform X1.
      
 0.749
LOC106771167
Senescence-associated carboxylesterase 101 isoform X1.
      
 0.749
LOC106763260
Putative disease resistance RPP13-like protein 1; Belongs to the disease resistance NB-LRR family.
      
 0.673
LOC111241710
Putative disease resistance RPP13-like protein 1; Belongs to the disease resistance NB-LRR family.
      
 0.673
LOC106778115
Putative disease resistance RPP13-like protein 1; Belongs to the disease resistance NB-LRR family.
      
 0.673
LOC106756898
TMV resistance protein N-like.
      
 0.614
LOC106762224
TMV resistance protein N.
      
 0.614
LOC106773533
TMV resistance protein N.
      
 0.614
LOC106764825
TMV resistance protein N isoform X1.
      
 0.614
LOC106774029
Putative disease resistance protein At4g11170.
      
 0.546
Your Current Organism:
Vigna radiata
NCBI taxonomy Id: 3916
Other names: Phaseolus aureus, Phaseolus aureus Roxb., Phaseolus radiatus, Phaseolus radiatus L., V. radiata var. radiata, Vigna radiata var. radiata, golden gram, green gram, mung bean
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