STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106775997beta-xylosidase/alpha-L-arabinofuranosidase 1 isoform X1. (775 aa)    
Predicted Functional Partners:
LOC106757692
Cellulose synthase-like protein D5; Belongs to the glycosyltransferase 2 family.
     
  0.900
LOC106774299
beta-xylosidase/alpha-L-arabinofuranosidase 2.
  
  
 
0.900
LOC106764309
Glucuronokinase 1.
     
  0.801
LOC106767786
NADPH-dependent aldo-keto reductase, chloroplastic isoform X1.
     
  0.800
LOC106773536
NADPH-dependent aldo-keto reductase, chloroplastic-like.
     
  0.800
LOC106774226
NADPH-dependent aldo-keto reductase, chloroplastic.
     
  0.800
LOC106774371
NADPH-dependent aldo-keto reductase, chloroplastic.
     
  0.800
LOC106774374
NADPH-dependent aldo-keto reductase, chloroplastic.
     
  0.800
LOC106778699
NADPH-dependent aldo-keto reductase, chloroplastic isoform X1.
     
  0.800
LOC106754917
Aldose reductase isoform X1.
     
  0.800
Your Current Organism:
Vigna radiata
NCBI taxonomy Id: 3916
Other names: Phaseolus aureus, Phaseolus aureus Roxb., Phaseolus radiatus, Phaseolus radiatus L., V. radiata var. radiata, Vigna radiata var. radiata, golden gram, green gram, mung bean
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