STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106777382Uncharacterized protein LOC106777382. (512 aa)    
Predicted Functional Partners:
LOC106764053
pre-mRNA-splicing factor ISY1 homolog.
   
 0.965
LOC106773609
SNW/SKI-interacting protein.
    
 0.961
LOC106777950
Crooked neck-like protein 1.
    
 0.961
LOC106753638
Intron-binding protein aquarius.
    
  0.930
LOC106753407
Peptidyl-prolyl cis-trans isomerase E.
   
 0.918
LOC106766890
Protein CWC15 homolog.
   
 
 0.909
LOC106760155
Protein pleiotropic regulatory locus 1.
   
 
 0.899
LOC106768658
110 kDa U5 small nuclear ribonucleoprotein component CLO.
   
 
 0.898
LOC106765239
Zinc finger CCCH domain-containing protein 40.
   
 0.896
LOC106776265
Zinc finger CCCH domain-containing protein 40-like isoform X1.
   
 0.896
Your Current Organism:
Vigna radiata
NCBI taxonomy Id: 3916
Other names: Phaseolus aureus, Phaseolus aureus Roxb., Phaseolus radiatus, Phaseolus radiatus L., V. radiata var. radiata, Vigna radiata var. radiata, golden gram, green gram, mung bean
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.