STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106777828Uncharacterized protein LOC106777828. (963 aa)    
Predicted Functional Partners:
LOC111242336
Uncharacterized protein LOC111242336.
  
     0.542
LOC106764489
Serine/arginine repetitive matrix protein 2.
  
     0.541
LOC106770742
Uncharacterized protein LOC106770742.
  
     0.540
LOC106772930
UPF0481 protein At3g47200.
  
     0.540
LOC106774111
UPF0481 protein At3g47200.
  
     0.538
LOC106773240
UPF0481 protein At3g47200-like.
  
     0.537
LOC106773793
UPF0481 protein At3g47200-like.
  
     0.537
LOC106755746
Uncharacterized protein LOC106755746.
  
     0.536
LOC106754162
Uncharacterized protein LOC106754162 isoform X1.
  
     0.535
LOC106762271
Uncharacterized protein LOC106762271.
  
     0.535
Your Current Organism:
Vigna radiata
NCBI taxonomy Id: 3916
Other names: Phaseolus aureus, Phaseolus aureus Roxb., Phaseolus radiatus, Phaseolus radiatus L., V. radiata var. radiata, Vigna radiata var. radiata, golden gram, green gram, mung bean
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.