STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106778132Epidermis-specific secreted glycoprotein EP1. (435 aa)    
Predicted Functional Partners:
LOC106753323
DEAD-box ATP-dependent RNA helicase 20 isoform X1; Belongs to the DEAD box helicase family.
      
 0.703
LOC106756290
F-box protein At2g16365 isoform X1.
      
 0.703
LOC106773733
Protein XRI1.
      
 0.690
LOC106771983
Phytochrome A isoform X1.
      
 0.684
LOC106775326
Methionine gamma-lyase.
      
 0.683
LOC106779813
Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family.
      
 0.683
LOC106771462
Histidine-containing phosphotransfer protein 1.
      
 0.681
LOC106775067
Histidine-containing phosphotransfer protein 1.
      
 0.681
LOC106775805
Importin subunit beta-1.
      
 0.679
LOC106774410
Uncharacterized protein LOC106774410 isoform X1.
      
 0.633
Your Current Organism:
Vigna radiata
NCBI taxonomy Id: 3916
Other names: Phaseolus aureus, Phaseolus aureus Roxb., Phaseolus radiatus, Phaseolus radiatus L., V. radiata var. radiata, Vigna radiata var. radiata, golden gram, green gram, mung bean
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.