STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106779113Glucan endo-1,3-beta-glucosidase 8; Belongs to the glycosyl hydrolase 17 family. (480 aa)    
Predicted Functional Partners:
LOC106769762
Armadillo repeat-containing protein LFR isoform X1.
    
 0.666
LOC106766995
Chromatin structure-remodeling complex protein BSH.
    
 0.621
LOC106779861
Uncharacterized protein LOC106779861.
    
 0.621
LOC106772937
Pectinesterase; Acts in the modification of cell walls via demethylesterification of cell wall pectin. In the C-terminal section; belongs to the pectinesterase family.
    
 
 0.589
LOC106753149
dnaJ protein homolog.
    
 0.554
LOC106761182
High mobility group B protein 9.
   
 
 0.540
LOC106762790
High mobility group B protein 10 isoform X1.
   
 
 0.540
LOC106769713
High mobility group B protein 15.
   
 
 0.540
LOC106770743
High mobility group B protein 15-like.
   
 
 0.540
LOC111242295
High mobility group B protein 10-like isoform X1.
   
 
 0.536
Your Current Organism:
Vigna radiata
NCBI taxonomy Id: 3916
Other names: Phaseolus aureus, Phaseolus aureus Roxb., Phaseolus radiatus, Phaseolus radiatus L., V. radiata var. radiata, Vigna radiata var. radiata, golden gram, green gram, mung bean
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.