STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106779496Probable calcium-binding protein CML22. (220 aa)    
Predicted Functional Partners:
LOC106779222
NO-associated protein 1, chloroplastic/mitochondrial.
     
  0.650
LOC106768501
Kinesin-like protein KIN-14E; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
    
 0.603
LOC106777740
Kinesin-like protein KIN-14I; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
    
 0.603
LOC106775858
Peptidylprolyl isomerase.
   
 0.551
LOC106762997
DNA repair protein RAD4 isoform X1.
    
 0.520
LOC106769418
Two pore calcium channel protein 1.
    
 
 0.494
LOC106774664
Uncharacterized protein LOC106774664 isoform X1.
   
 0.470
LOC106775365
Uncharacterized protein LOC106775365.
   
 0.470
LOC106779602
Probable serine/threonine-protein kinase PBL8; Belongs to the protein kinase superfamily.
    
 0.431
LOC106754577
Ankyrin-3.
    
 0.428
Your Current Organism:
Vigna radiata
NCBI taxonomy Id: 3916
Other names: Phaseolus aureus, Phaseolus aureus Roxb., Phaseolus radiatus, Phaseolus radiatus L., V. radiata var. radiata, Vigna radiata var. radiata, golden gram, green gram, mung bean
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.