STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106754356Calcium-dependent protein kinase 2. (549 aa)    
Predicted Functional Partners:
LOC106774469
Putative MO25-like protein At5g47540 isoform X1.
      
 0.745
LOC106774511
Calcium-binding protein 39.
      
 0.745
LOC106761966
Respiratory burst oxidase homolog protein C.
   
 
 0.664
LOC106768745
Respiratory burst oxidase homolog protein C isoform X1.
   
 
 0.664
LOC106772356
Respiratory burst oxidase homolog protein B.
   
 
 0.664
LOC106775899
Respiratory burst oxidase homolog protein B.
   
 
 0.664
LOC106760800
Respiratory burst oxidase homolog protein E.
   
 
 0.659
LOC106768261
Respiratory burst oxidase homolog protein A.
   
 
 0.659
LOC106768869
Respiratory burst oxidase homolog protein A.
   
 
 0.659
LOC106777710
Respiratory burst oxidase homolog protein A.
   
 
 0.659
Your Current Organism:
Vigna radiata
NCBI taxonomy Id: 3916
Other names: Phaseolus aureus, Phaseolus aureus Roxb., Phaseolus radiatus, Phaseolus radiatus L., V. radiata var. radiata, Vigna radiata var. radiata, golden gram, green gram, mung bean
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