STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106760560Exopolygalacturonase-like. (404 aa)    
Predicted Functional Partners:
LOC106764309
Glucuronokinase 1.
     
  0.800
LOC106768507
Galacturonokinase isoform X1.
     
  0.800
LOC106765006
L-arabinokinase isoform X1.
     
  0.800
LOC106773280
Probable polygalacturonase At3g15720.
  
  
 
0.696
LOC106773272
Probable polygalacturonase At3g15720.
  
  
 
0.694
LOC106773271
Probable polygalacturonase At3g15720.
  
  
 
0.692
LOC106773281
Probable polygalacturonase At3g15720.
  
  
 
0.692
LOC106768182
Polygalacturonase At1g48100.
  
  
 
0.690
LOC106773279
Probable polygalacturonase At3g15720.
  
  
 
0.689
LOC106778260
Probable polygalacturonase At3g15720.
  
  
 
0.685
Your Current Organism:
Vigna radiata
NCBI taxonomy Id: 3916
Other names: Phaseolus aureus, Phaseolus aureus Roxb., Phaseolus radiatus, Phaseolus radiatus L., V. radiata var. radiata, Vigna radiata var. radiata, golden gram, green gram, mung bean
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.