STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106767982Zinc finger CCCH domain-containing protein 45 isoform X1. (201 aa)    
Predicted Functional Partners:
LOC106770907
Cleavage stimulation factor subunit 77 isoform X1.
   
 0.997
LOC106774814
Cleavage and polyadenylation specificity factor subunit 2.
    
 0.997
LOC106774563
Pre-mRNA cleavage factor Im 25 kDa subunit; Component of the cleavage factor Im (CFIm) complex that plays a key role in pre-mRNA 3'-processing.
    
 0.996
LOC106775850
Cleavage stimulation factor subunit 50 isoform X1.
   
 0.996
LOC106761346
Pre-mRNA cleavage factor Im 25 kDa subunit; Component of the cleavage factor Im (CFIm) complex that plays a key role in pre-mRNA 3'-processing.
    
 0.995
LOC106772716
Cleavage and polyadenylation specificity factor subunit 3-II isoform X1.
    
 0.995
LOC106759444
2,3-bisphosphoglycerate-independent phosphoglycerate mutase.
    
 0.992
LOC106772085
Protein CLP1 homolog; Required for endonucleolytic cleavage during polyadenylation- dependent pre-mRNA 3'-end formation; Belongs to the Clp1 family. Clp1 subfamily.
    
 0.992
LOC106752779
Uncharacterized protein LOC106752779 isoform X1.
   
 0.991
LOC106754017
FIP1[III]-like protein isoform X1.
    
 0.991
Your Current Organism:
Vigna radiata
NCBI taxonomy Id: 3916
Other names: Phaseolus aureus, Phaseolus aureus Roxb., Phaseolus radiatus, Phaseolus radiatus L., V. radiata var. radiata, Vigna radiata var. radiata, golden gram, green gram, mung bean
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.