STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106775206Uncharacterized protein At5g19025 isoform X1. (274 aa)    
Predicted Functional Partners:
LOC106780554
Uncharacterized protein LOC106780554.
  
     0.515
LOC111241481
Hydroquinone glucosyltransferase-like.
  
     0.513
LOC106775156
F-box/kelch-repeat protein At5g26960.
  
     0.484
LOC106769020
Lipid transfer-like protein VAS; Belongs to the plant LTP family.
  
     0.480
LOC106766618
Uncharacterized protein LOC106766618.
  
     0.472
LOC106765836
Protein SHORT-ROOT-like; Belongs to the GRAS family.
  
     0.451
LOC106776983
Protein SHORT-ROOT; Belongs to the GRAS family.
  
     0.440
LOC106755953
Auxin-responsive protein SAUR68-like.
  
     0.422
LOC106772618
BTB/POZ domain-containing protein NPY2; Belongs to the NPH3 family.
  
     0.422
LOC106765616
Uncharacterized protein LOC106765616.
  
     0.417
Your Current Organism:
Vigna radiata
NCBI taxonomy Id: 3916
Other names: Phaseolus aureus, Phaseolus aureus Roxb., Phaseolus radiatus, Phaseolus radiatus L., V. radiata var. radiata, Vigna radiata var. radiata, golden gram, green gram, mung bean
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.