STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BBAL3_1024[S] COG4253 Uncharacterized protein conserved in bacteria. (122 aa)    
Predicted Functional Partners:
BBAL3_1963
[O] COG3118 Thioredoxin domain-containing protein.
    
   0.723
BBAL3_483
Thioredoxin; [OC] COG0526 Thiol-disulfide isomerase and thioredoxins; Belongs to the thioredoxin family.
    
   0.723
nadE
NAD synthase family; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
    
  0.688
nadE-2
Hydrolase, carbon-nitrogen family; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
    
  0.688
BBAL3_3029
MazG family protein; [R] COG1694 Predicted pyrophosphatase.
    
  0.672
BBAL3_3056
D-alanyl-D-alanine carboxypeptidase family.
       0.606
BBAL3_2563
Catalytic LigB subunit of aromatic ring-opening dioxygenase superfamily; [S] COG3384 Uncharacterized conserved protein.
       0.531
BBAL3_27
NAD(P)H:quinone oxidoreductase, type IV; [R] COG0655 Multimeric flavodoxin WrbA.
       0.531
nadD
Nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD).
    
  0.506
BBAL3_1161
NAD(P) transhydrogenase beta subunit superfamily; The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane; Belongs to the PNT beta subunit family.
     
  0.495
Your Current Organism:
Brevundimonas sp. BAL3
NCBI taxonomy Id: 391600
Other names: B. sp. BAL3
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