STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BBAL3_1280Conserved hypothetical protein; [S] COG3152 Predicted membrane protein. (233 aa)    
Predicted Functional Partners:
BBAL3_3161
Hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
     0.669
BBAL3_2257
Hypothetical protein; [Q] COG0412 Dienelactone hydrolase and related enzymes.
  
   
 0.649
BBAL3_823
Hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
    0.619
BBAL3_1865
Hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
     0.614
BBAL3_1424
Hypothetical protein; [CP] COG1668 ABC-type Na+ efflux pump, permease component.
 
     0.609
BBAL3_1747
Hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
     0.592
BBAL3_352
Hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
     0.582
BBAL3_92
Autotransporter beta-domain protein; [S] COG4625 Uncharacterized protein with a C-terminal OMP (outer membrane protein) domain.
  
     0.554
BBAL3_2040
TonB-dependent receptor plug domain protein; [P] COG1629 Outer membrane receptor proteins, mostly Fe transport.
  
     0.553
BBAL3_1914
Hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
     0.551
Your Current Organism:
Brevundimonas sp. BAL3
NCBI taxonomy Id: 391600
Other names: B. sp. BAL3
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