Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
BBAL3_1158 | BBAL3_1336 | [L] COG0629 Single-stranded DNA-binding protein. | [L] COG2925 Exonuclease I. | 0.560 |
BBAL3_1158 | BBAL3_1931 | [L] COG0629 Single-stranded DNA-binding protein. | single-stranded-DNA-specific exonuclease RecJ; [L] COG0608 Single-stranded DNA-specific exonuclease. | 0.510 |
BBAL3_1336 | BBAL3_1158 | [L] COG2925 Exonuclease I. | [L] COG0629 Single-stranded DNA-binding protein. | 0.560 |
BBAL3_1336 | BBAL3_160 | [L] COG2925 Exonuclease I. | [L] COG0629 Single-stranded DNA-binding protein. | 0.560 |
BBAL3_1336 | BBAL3_1931 | [L] COG2925 Exonuclease I. | single-stranded-DNA-specific exonuclease RecJ; [L] COG0608 Single-stranded DNA-specific exonuclease. | 0.605 |
BBAL3_1336 | BBAL3_2418 | [L] COG2925 Exonuclease I. | Hypothetical protein; [L] COG0629 Single-stranded DNA-binding protein. | 0.512 |
BBAL3_1336 | BBAL3_2766 | [L] COG2925 Exonuclease I. | Hypothetical protein. | 0.512 |
BBAL3_1336 | BBAL3_3255 | [L] COG2925 Exonuclease I. | [L] COG0629 Single-stranded DNA-binding protein. | 0.560 |
BBAL3_1336 | BBAL3_441 | [L] COG2925 Exonuclease I. | Hypothetical protein; [L] COG0629 Single-stranded DNA-binding protein. | 0.512 |
BBAL3_1336 | BBAL3_547 | [L] COG2925 Exonuclease I. | [L] COG0629 Single-stranded DNA-binding protein. | 0.560 |
BBAL3_1336 | BBAL3_820 | [L] COG2925 Exonuclease I. | Helix-turn-helix domain protein. | 0.777 |
BBAL3_1336 | BBAL3_855 | [L] COG2925 Exonuclease I. | Conserved domain protein. | 0.843 |
BBAL3_160 | BBAL3_1336 | [L] COG0629 Single-stranded DNA-binding protein. | [L] COG2925 Exonuclease I. | 0.560 |
BBAL3_160 | BBAL3_1931 | [L] COG0629 Single-stranded DNA-binding protein. | single-stranded-DNA-specific exonuclease RecJ; [L] COG0608 Single-stranded DNA-specific exonuclease. | 0.433 |
BBAL3_160 | BBAL3_441 | [L] COG0629 Single-stranded DNA-binding protein. | Hypothetical protein; [L] COG0629 Single-stranded DNA-binding protein. | 0.845 |
BBAL3_1931 | BBAL3_1158 | single-stranded-DNA-specific exonuclease RecJ; [L] COG0608 Single-stranded DNA-specific exonuclease. | [L] COG0629 Single-stranded DNA-binding protein. | 0.510 |
BBAL3_1931 | BBAL3_1336 | single-stranded-DNA-specific exonuclease RecJ; [L] COG0608 Single-stranded DNA-specific exonuclease. | [L] COG2925 Exonuclease I. | 0.605 |
BBAL3_1931 | BBAL3_160 | single-stranded-DNA-specific exonuclease RecJ; [L] COG0608 Single-stranded DNA-specific exonuclease. | [L] COG0629 Single-stranded DNA-binding protein. | 0.433 |
BBAL3_1931 | BBAL3_3255 | single-stranded-DNA-specific exonuclease RecJ; [L] COG0608 Single-stranded DNA-specific exonuclease. | [L] COG0629 Single-stranded DNA-binding protein. | 0.451 |
BBAL3_2418 | BBAL3_1336 | Hypothetical protein; [L] COG0629 Single-stranded DNA-binding protein. | [L] COG2925 Exonuclease I. | 0.512 |
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