STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BBAL3_154D12 class N6 adenine-specific DNA methyltransferase superfamily; [L] COG3392 Adenine-specific DNA methylase. (345 aa)    
Predicted Functional Partners:
BBAL3_2337
[G] COG0469 Pyruvate kinase; Belongs to the pyruvate kinase family.
       0.592
BBAL3_2858
Hypothetical protein.
       0.590
BBAL3_1168
[S] COG3584 Uncharacterized protein conserved in bacteria; 3D domain family.
  
     0.571
BBAL3_3010
Hypothetical protein.
  
     0.552
BBAL3_2578
Hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
     0.544
BBAL3_2721
Peptidase, M28 family; [R] COG2234 Predicted aminopeptidases.
  
     0.520
BBAL3_2747
Bacterial pre-peptidase C-terminal domain family; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
     0.517
BBAL3_1019
D12 class N6 adenine-specific DNA methyltransferase superfamily; [L] COG0338 Site-specific DNA methylase.
    
 0.488
BBAL3_2994
D12 class N6 adenine-specific DNA methyltransferase superfamily; [L] COG0338 Site-specific DNA methylase.
    
 0.488
BBAL3_352
Hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
     0.484
Your Current Organism:
Brevundimonas sp. BAL3
NCBI taxonomy Id: 391600
Other names: B. sp. BAL3
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