STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BBAL3_1663Hypothetical protein; [P] COG2906 Bacterioferritin-associated ferredoxin. (48 aa)    
Predicted Functional Partners:
BBAL3_566
Bacterioferritin; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex; Belongs to the bacterioferritin family.
  
 
 0.926
thiE
Thiamine-phosphate pyrophosphorylase; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP). Belongs to the thiamine-phosphate synthase family.
       0.540
BBAL3_688
[E] COG0069 Glutamate synthase domain 2.
     
 0.535
BBAL3_2020
Molybdopterin oxidoreductase Fe4S4 domain family; [C] COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
    
 0.510
BBAL3_3410
Nitrite and sulphite reductase 4Fe-4S domain protein; [P] COG0155 Sulfite reductase, beta subunit (hemoprotein).
    
 0.505
gpsA
NAD-dependent glycerol-3-phosphate dehydrogenase C-terminal domain family protein; [C] COG0240 Glycerol-3-phosphate dehydrogenase; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.
     
  0.413
BBAL3_1370
Hypothetical protein; [C] COG2010 Cytochrome c, mono- and diheme variants.
     
  0.413
BBAL3_1482
[C] COG1140 Nitrate reductase beta subunit.
     
  0.413
BBAL3_1659
[R] COG2070 Dioxygenases related to 2-nitropropane dioxygenase.
     
  0.413
BBAL3_2414
Nitrate reductase, alpha subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
     
  0.413
Your Current Organism:
Brevundimonas sp. BAL3
NCBI taxonomy Id: 391600
Other names: B. sp. BAL3
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