STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BBAL3_1764[N] COG5622 Protein required for attachment to host cells. (159 aa)    
Predicted Functional Partners:
BBAL3_2218
Hypothetical protein; [S] COG5502 Uncharacterized conserved protein.
 
     0.802
BBAL3_61
RNA-metabolising metallo-beta-lactamase family; [J] COG1236 Predicted exonuclease of the beta-lactamase fold involved in RNA processing.
       0.757
BBAL3_2223
Hypothetical protein; [LR] COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes.
  
     0.739
BBAL3_3056
D-alanyl-D-alanine carboxypeptidase family.
  
     0.657
BBAL3_1370
Hypothetical protein; [C] COG2010 Cytochrome c, mono- and diheme variants.
 
     0.634
BBAL3_1915
Hsp20/alpha crystallin family; [O] COG0071 Molecular chaperone (small heat shock protein); Belongs to the small heat shock protein (HSP20) family.
 
     0.624
BBAL3_2852
[T] COG0589 Universal stress protein UspA and related nucleotide-binding proteins.
 
     0.602
BBAL3_1748
Hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
     0.576
BBAL3_3374
Hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
     0.571
BBAL3_2222
Hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
     0.570
Your Current Organism:
Brevundimonas sp. BAL3
NCBI taxonomy Id: 391600
Other names: B. sp. BAL3
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