Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
BBAL3_20042-dehydro-3-deoxygalactonokinase superfamily; [G] COG3734 2-keto-3-deoxy-galactonokinase. (297 aa)    
Predicted Functional Partners:
BBAL3_1003
KDPG and KHG aldolase subfamily; [G] COG0800 2-keto-3-deoxy-6-phosphogluconate aldolase.
 
 
 0.993
BBAL3_3023
SMP-30/Gluconolaconase/LRE-like region superfamily; [G] COG3386 Gluconolactonase.
 
     0.933
BBAL3_2537
Transporter, SSS family, putative; [R] COG4146 Predicted symporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
       0.814
rhmD
Mandelate racemase / muconate lactonizing enzyme, C-terminal domain protein; Catalyzes the dehydration of L-rhamnonate to 2-keto-3-deoxy- L-rhamnonate (KDR).
 
 
 0.776
BBAL3_268
Hypothetical protein; [G] COG3386 Gluconolactonase.
 
     0.729
BBAL3_3435
Dehydratase family; [EG] COG0129 Dihydroxyacid dehydratase/phosphogluconate dehydratase; Belongs to the IlvD/Edd family.
 
   
 0.711
BBAL3_3254
IclR helix-turn-helix domain family; [K] COG1414 Transcriptional regulator.
 
     0.688
BBAL3_440
KDPG and KHG aldolase subfamily; [G] COG0800 2-keto-3-deoxy-6-phosphogluconate aldolase.
 
  
 0.586
BBAL3_1460
Amidohydrolase family; [R] COG3618 Predicted metal-dependent hydrolase of the TIM-barrel fold.
  
     0.504
BBAL3_2049
Aldose 1-epimerase subfamily; [G] COG2017 Galactose mutarotase and related enzymes.
 
     0.488
Your Current Organism:
Brevundimonas sp. BAL3
NCBI taxonomy Id: 391600
Other names: B. sp. BAL3
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