STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BBAL3_2012Hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit. (111 aa)    
Predicted Functional Partners:
BBAL3_2931
Hypothetical protein.
  
     0.613
BBAL3_563
TOBE domain family; [G] COG3839 ABC-type sugar transport systems, ATPase components; Belongs to the ABC transporter superfamily.
     
  0.582
BBAL3_872
ABC transporter, permease protein, putative; [G] COG1175 ABC-type sugar transport systems, permease components.
     
  0.512
BBAL3_2799
Bacterial extracellular solute-binding protein, putative; [G] COG1653 ABC-type sugar transport system, periplasmic component.
     
  0.501
guaA
ExsB family; Catalyzes the synthesis of GMP from XMP.
     
 0.489
BBAL3_95
Hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
     0.462
BBAL3_495
Type I phosphodiesterase / nucleotide pyrophosphatase superfamily; [R] COG1524 Uncharacterized proteins of the AP superfamily.
  
     0.413
BBAL3_2788
Hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
     0.410
BBAL3_3216
Hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
     0.403
Your Current Organism:
Brevundimonas sp. BAL3
NCBI taxonomy Id: 391600
Other names: B. sp. BAL3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.