STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Cooccurrence
Coexpression
Experiments
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[Homology]
Score
BBAL3_22Alcohol dehydrogenase GroES-like domain family; [ER] COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases. (350 aa)    
Predicted Functional Partners:
kbl
2-amino-3-ketobutyrate coenzyme A ligase; Catalyzes the cleavage of 2-amino-3-ketobutyrate to glycine and acetyl-CoA.
 
 
 0.993
BBAL3_3281
[E] COG1171 Threonine dehydratase.
   
 
 0.851
BBAL3_762
Beta-eliminating lyase superfamily; [E] COG2008 Threonine aldolase.
     
 0.842
BBAL3_1889
[E] COG0498 Threonine synthase.
     
 0.841
BBAL3_1622
Pyridoxal-phosphate dependent enzyme superfamily; [E] COG1171 Threonine dehydratase.
   
 
 0.839
ilvA
Threonine ammonia-lyase, biosynthetic; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2- ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA.
   
 
 0.839
BBAL3_1919
5-aminolevulinic acid synthase; [H] COG0156 7-keto-8-aminopelargonate synthetase and related enzymes.
 
 
 0.838
trmB
tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.
     
  0.708
BBAL3_2014
Phosphoglucomutase, alpha-D-glucose phosphate-specific; [G] COG0033 Phosphoglucomutase.
   
 0.695
BBAL3_2779
Transketolase, pyridine binding domain protein; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.
  
 
 0.677
Your Current Organism:
Brevundimonas sp. BAL3
NCBI taxonomy Id: 391600
Other names: B. sp. BAL3
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