STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BBAL3_2298[P] COG1629 Outer membrane receptor proteins, mostly Fe transport. (979 aa)    
Predicted Functional Partners:
BBAL3_2202
[P] COG1629 Outer membrane receptor proteins, mostly Fe transport.
  
 
  0.792
BBAL3_1933
TonB-dependent receptor plug domain protein; [P] COG1629 Outer membrane receptor proteins, mostly Fe transport.
  
 
  0.786
BBAL3_2635
[P] COG1629 Outer membrane receptor proteins, mostly Fe transport.
  
 
  0.781
BBAL3_410
[P] COG1629 Outer membrane receptor proteins, mostly Fe transport.
  
 
  0.753
BBAL3_452
[P] COG1629 Outer membrane receptor proteins, mostly Fe transport.
  
 
  0.747
BBAL3_353
TonB-dependent receptor plug domain protein; [P] COG1629 Outer membrane receptor proteins, mostly Fe transport.
  
 
  0.720
BBAL3_54
[P] COG1629 Outer membrane receptor proteins, mostly Fe transport.
  
 
  0.693
BBAL3_1795
[P] COG1629 Outer membrane receptor proteins, mostly Fe transport.
  
 
  0.682
BBAL3_2211
[P] COG1629 Outer membrane receptor proteins, mostly Fe transport.
  
 
  0.646
BBAL3_31
[P] COG1629 Outer membrane receptor proteins, mostly Fe transport.
  
 
  0.627
Your Current Organism:
Brevundimonas sp. BAL3
NCBI taxonomy Id: 391600
Other names: B. sp. BAL3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.