STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BBAL3_249Hypothetical protein; [C] COG0778 Nitroreductase. (86 aa)    
Predicted Functional Partners:
BBAL3_1915
Hsp20/alpha crystallin family; [O] COG0071 Molecular chaperone (small heat shock protein); Belongs to the small heat shock protein (HSP20) family.
  
    0.705
BBAL3_1880
Siroheme synthase, N-terminal domain protein; [H] COG1648 Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain).
    
 0.699
BBAL3_2976
uroporphyrin-III C-methyltransferase domain protein; Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD-dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme.
    
 0.699
BBAL3_1882
ABC-2 type transporter family; [V] COG0842 ABC-type multidrug transport system, permease component.
  
    0.574
BBAL3_1952
ABC-2 type transporter superfamily; [V] COG0842 ABC-type multidrug transport system, permease component.
  
    0.574
BBAL3_2050
ABC-2 type transporter superfamily; [V] COG0842 ABC-type multidrug transport system, permease component.
  
    0.574
BBAL3_1764
[N] COG5622 Protein required for attachment to host cells.
       0.509
BBAL3_2218
Hypothetical protein; [S] COG5502 Uncharacterized conserved protein.
       0.509
BBAL3_61
RNA-metabolising metallo-beta-lactamase family; [J] COG1236 Predicted exonuclease of the beta-lactamase fold involved in RNA processing.
       0.499
BBAL3_265
Hypothetical protein.
       0.482
Your Current Organism:
Brevundimonas sp. BAL3
NCBI taxonomy Id: 391600
Other names: B. sp. BAL3
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