STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BBAL3_2497Transcriptional regulator, LuxR family protein. (158 aa)    
Predicted Functional Partners:
BBAL3_758
Sigma-70, region 4 family; [K] COG2771 DNA-binding HTH domain-containing proteins.
  
 0.972
BBAL3_227
Peptidase, M61 (glycyl aminopeptidase) family protein.
  
     0.700
BBAL3_759
Transcriptional regulator, TetR family protein; [K] COG1309 Transcriptional regulator.
  
   
 0.667
BBAL3_2931
Hypothetical protein.
  
     0.605
BBAL3_2723
Metallo-beta-lactamase superfamily protein; [R] COG0491 Zn-dependent hydrolases, including glyoxylases.
  
 
   0.591
BBAL3_3074
Hypothetical protein; [K] COG2378 Predicted transcriptional regulator.
  
     0.584
BBAL3_2409
[TK] COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain.
  
 0.570
BBAL3_36
Sigma-70, region 4 family; [TK] COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain.
  
 0.570
BBAL3_399
HTH DNA binding domain family; [TK] COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain.
  
 0.570
BBAL3_429
Transcriptional regulator, LuxR family, putative; [K] COG2771 DNA-binding HTH domain-containing proteins.
  
 0.570
Your Current Organism:
Brevundimonas sp. BAL3
NCBI taxonomy Id: 391600
Other names: B. sp. BAL3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.