STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BBAL3_255ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein; [T] COG0642 Signal transduction histidine kinase. (630 aa)    
Predicted Functional Partners:
BBAL3_3086
MASE1 domain family; [T] COG0642 Signal transduction histidine kinase.
 
0.995
BBAL3_3321
[M] COG3064 Membrane protein involved in colicin uptake.
  
 0.995
BBAL3_1855
PAS fold family; [T] COG0642 Signal transduction histidine kinase.
 
0.994
BBAL3_2362
PAS fold family; [T] COG0642 Signal transduction histidine kinase.
 
0.994
BBAL3_2720
ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein; [T] COG0642 Signal transduction histidine kinase.
 
0.994
BBAL3_225
Response regulator receiver domain protein; [T] COG0784 FOG: CheY-like receiver.
  
 0.993
BBAL3_3191
PAS fold family; [T] COG0642 Signal transduction histidine kinase.
 0.993
BBAL3_336
PAS fold family; [T] COG0642 Signal transduction histidine kinase.
0.993
BBAL3_1462
PAS fold family; [T] COG0642 Signal transduction histidine kinase.
 
0.991
BBAL3_2698
Bacterial signalling protein N terminal repeat; [T] COG0642 Signal transduction histidine kinase.
 
0.991
Your Current Organism:
Brevundimonas sp. BAL3
NCBI taxonomy Id: 391600
Other names: B. sp. BAL3
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