Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
BBAL3_265Hypothetical protein. (52 aa)    
Predicted Functional Partners:
BBAL3_103
Pyridoxamine 5'-phosphate oxidase family protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
       0.576
BBAL3_1370
Hypothetical protein; [C] COG2010 Cytochrome c, mono- and diheme variants.
       0.576
BBAL3_249
Hypothetical protein; [C] COG0778 Nitroreductase.
       0.482
BBAL3_1915
Hsp20/alpha crystallin family; [O] COG0071 Molecular chaperone (small heat shock protein); Belongs to the small heat shock protein (HSP20) family.
       0.441
Your Current Organism:
Brevundimonas sp. BAL3
NCBI taxonomy Id: 391600
Other names: B. sp. BAL3
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