STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BBAL3_2874Flp/Fap pilin component superfamily; [U] COG3847 Flp pilus assembly protein, pilin Flp. (59 aa)    
Predicted Functional Partners:
BBAL3_2752
[U] COG4963 Flp pilus assembly protein, ATPase CpaE.
 
  
 0.773
BBAL3_933
[U] COG3745 Flp pilus assembly protein CpaB.
 
  
 0.767
BBAL3_3100
PPIC-type PPIASE domain protein; [O] COG0760 Parvulin-like peptidyl-prolyl isomerase.
 
     0.745
argJ
Arginine biosynthesis bifunctional protein ArgJ; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of N-acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate. Belongs to the ArgJ family.
       0.710
BBAL3_2697
Hydrolase, NUDIX family, putative; [LR] COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes.
       0.697
BBAL3_1829
Peptidase, A24 (type IV prepilin peptidase) family; [E] COG0665 Glycine/D-amino acid oxidases (deaminating).
 
  
 0.655
BBAL3_1729
Hypothetical protein.
       0.598
BBAL3_2992
Hypothetical protein.
  
     0.507
BBAL3_371
[U] COG4964 Flp pilus assembly protein, secretin CpaC.
 
  
 0.454
secA
Preprotein translocase, SecA subunit; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving both as a receptor for the preprotein-SecB complex and as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane. Belongs to the SecA family.
       0.449
Your Current Organism:
Brevundimonas sp. BAL3
NCBI taxonomy Id: 391600
Other names: B. sp. BAL3
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