STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BBAL3_3048TonB-dependent receptor subfamily; [P] COG1629 Outer membrane receptor proteins, mostly Fe transport. (925 aa)    
Predicted Functional Partners:
BBAL3_2284
[GEPR] COG0477 Permeases of the major facilitator superfamily.
  
   
 0.841
BBAL3_3001
Tryptophan halogenase superfamily; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
     0.772
BBAL3_2452
Tryptophan halogenase superfamily; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
 
     0.770
BBAL3_2793
Tryptophan halogenase superfamily; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
 
     0.770
BBAL3_3331
Tryptophan halogenase superfamily; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
 
     0.770
BBAL3_2067
Alpha amylase, catalytic domain subfamily; [G] COG0366 Glycosidases; overlaps another CDS with the same product name.
 
   
 0.739
BBAL3_3456
Glucan 1,4-alpha-glucosidase; [G] COG3387 Glucoamylase and related glycosyl hydrolases.
  
   
 0.738
BBAL3_1334
Hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
 
    0.691
BBAL3_697
Transporter, major facilitator family; [G] COG0738 Fucose permease.
 
    0.689
BBAL3_54
[P] COG1629 Outer membrane receptor proteins, mostly Fe transport.
  
 
  0.683
Your Current Organism:
Brevundimonas sp. BAL3
NCBI taxonomy Id: 391600
Other names: B. sp. BAL3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.