STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BBAL3_308Periplasmic binding proteins and sugar binding domain of the LacI family, putative; [K] COG1609 Transcriptional regulators. (355 aa)    
Predicted Functional Partners:
BBAL3_688
[E] COG0069 Glutamate synthase domain 2.
    
 
 0.864
BBAL3_2489
Phosphocarrier, HPr family; [E] COG0065 3-isopropylmalate dehydratase large subunit.
 
 
 
 0.772
BBAL3_3331
Tryptophan halogenase superfamily; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
 
     0.742
BBAL3_2452
Tryptophan halogenase superfamily; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
 
     0.739
ribB
3,4-dihydroxy-2-butanone 4-phosphate synthase family; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family.
    
   0.588
BBAL3_2413
TonB-dependent receptor subfamily; [P] COG1629 Outer membrane receptor proteins, mostly Fe transport.
 
     0.536
guaA
ExsB family; Catalyzes the synthesis of GMP from XMP.
    
   0.486
pheT
[J] COG0072 Phenylalanyl-tRNA synthetase beta subunit; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.
    
   0.456
rbsK
Kinase, pfkB family; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.
 
 
 0.449
BBAL3_3204
[P] COG1629 Outer membrane receptor proteins, mostly Fe transport.
       0.448
Your Current Organism:
Brevundimonas sp. BAL3
NCBI taxonomy Id: 391600
Other names: B. sp. BAL3
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