Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
BBAL3_214 | BBAL3_309 | SCP-2 sterol transfer family; [I] COG3255 Putative sterol carrier protein. | PQ loop repeat superfamily; [S] COG4095 Uncharacterized conserved protein. | 0.419 |
BBAL3_2448 | BBAL3_309 | Dipeptidyl peptidase IV N-terminal region domain protein; [E] COG1506 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases. | PQ loop repeat superfamily; [S] COG4095 Uncharacterized conserved protein. | 0.473 |
BBAL3_2448 | BBAL3_3283 | Dipeptidyl peptidase IV N-terminal region domain protein; [E] COG1506 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases. | Amidase, putative; [J] COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases. | 0.540 |
BBAL3_2920 | BBAL3_309 | [T] COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases. | PQ loop repeat superfamily; [S] COG4095 Uncharacterized conserved protein. | 0.449 |
BBAL3_309 | BBAL3_214 | PQ loop repeat superfamily; [S] COG4095 Uncharacterized conserved protein. | SCP-2 sterol transfer family; [I] COG3255 Putative sterol carrier protein. | 0.419 |
BBAL3_309 | BBAL3_2448 | PQ loop repeat superfamily; [S] COG4095 Uncharacterized conserved protein. | Dipeptidyl peptidase IV N-terminal region domain protein; [E] COG1506 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases. | 0.473 |
BBAL3_309 | BBAL3_2920 | PQ loop repeat superfamily; [S] COG4095 Uncharacterized conserved protein. | [T] COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases. | 0.449 |
BBAL3_309 | BBAL3_3283 | PQ loop repeat superfamily; [S] COG4095 Uncharacterized conserved protein. | Amidase, putative; [J] COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases. | 0.671 |
BBAL3_3283 | BBAL3_2448 | Amidase, putative; [J] COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases. | Dipeptidyl peptidase IV N-terminal region domain protein; [E] COG1506 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases. | 0.540 |
BBAL3_3283 | BBAL3_309 | Amidase, putative; [J] COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases. | PQ loop repeat superfamily; [S] COG4095 Uncharacterized conserved protein. | 0.671 |