STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
BBAL3_320Glycosyl hydrolase family 3 N terminal domain protein; [G] COG1472 Beta-glucosidase-related glycosidases. (829 aa)    
Predicted Functional Partners:
BBAL3_1334
Hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
  
 0.805
BBAL3_118
Alpha amylase, catalytic domain subfamily; [G] COG0366 Glycosidases; overlaps another CDS with the same product name.
     
 0.684
BBAL3_1759
Glycosyl hydrolases family 16; [G] COG2273 Beta-glucanase/Beta-glucan synthetase.
 
  
  0.674
BBAL3_965
Glycosyl hydrolase family 3 N terminal domain protein; [G] COG1472 Beta-glucosidase-related glycosidases.
  
  
 
0.643
BBAL3_1108
Glycosyl hydrolase family 3 N terminal domain protein; [G] COG1472 Beta-glucosidase-related glycosidases; Belongs to the glycosyl hydrolase 3 family.
  
  
 
0.631
BBAL3_1559
Glycosyl hydrolase family 3 N terminal domain protein; [G] COG1472 Beta-glucosidase-related glycosidases; Belongs to the glycosyl hydrolase 3 family.
  
  
 
0.629
BBAL3_2793
Tryptophan halogenase superfamily; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
  
  0.606
BBAL3_243
Bacterial alpha-L-rhamnosidase family; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
 
  
  0.593
BBAL3_2452
Tryptophan halogenase superfamily; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
  
  0.589
BBAL3_3331
Tryptophan halogenase superfamily; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
  
  0.589
Your Current Organism:
Brevundimonas sp. BAL3
NCBI taxonomy Id: 391600
Other names: B. sp. BAL3
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