STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BBAL3_3205FAD dependent oxidoreductase, putative; [E] COG0665 Glycine/D-amino acid oxidases (deaminating). (338 aa)    
Predicted Functional Partners:
thiG
Thiazole biosynthesis protein ThiG; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S.
 
 
 0.947
BBAL3_1352
Pyridine nucleotide-disulphide oxidoreductase, putative; [R] COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases.
   
 0.921
BBAL3_2393
[E] COG0404 Glycine cleavage system T protein (aminomethyltransferase).
  
 0.870
BBAL3_688
[E] COG0069 Glutamate synthase domain 2.
  
 
 0.800
BBAL3_2020
Molybdopterin oxidoreductase Fe4S4 domain family; [C] COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
    
 0.753
BBAL3_1765
Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.
  
  
 0.619
purK
Phosphoribosylaminoimidazole carboxylase, ATPase subunit; Catalyzes the ATP-dependent conversion of 5-aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5-carboxyaminoimidazole ribonucleotide (N5-CAIR).
       0.547
BBAL3_2736
[H] COG2104 Sulfur transfer protein involved in thiamine biosynthesis.
 
 
 0.521
hisB
[E] COG0131 Imidazoleglycerol-phosphate dehydratase.
     
 0.515
BBAL3_821
Hypothetical protein; [G] COG2513 PEP phosphonomutase and related enzymes.
 
 
 0.515
Your Current Organism:
Brevundimonas sp. BAL3
NCBI taxonomy Id: 391600
Other names: B. sp. BAL3
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