STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BBAL3_3208Type I secretion outer membrane protein, TolC family; [MU] COG1538 Outer membrane protein. (511 aa)    
Predicted Functional Partners:
BBAL3_1055
Auxiliary transport protein, MFP family, putative; [M] COG0845 Membrane-fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
  0.921
BBAL3_1569
RND transporter, HAE1/HME family, permease protein; [V] COG0841 Cation/multidrug efflux pump; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 0.910
BBAL3_554
RND transporter, HAE1 family; [V] COG0841 Cation/multidrug efflux pump.
 
 0.902
BBAL3_1106
Auxiliary transport protein, MFP family, putative; [M] COG0845 Membrane-fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
  0.721
BBAL3_1828
Auxiliary transport protein, MFP family, putative; [M] COG0845 Membrane-fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.721
BBAL3_798
Efflux transporter, RND family, MFP subunit; [M] COG0845 Membrane-fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
  0.720
BBAL3_1788
Auxiliary transport protein, MFP family, putative; [M] COG0845 Membrane-fusion protein.
 
 0.715
BBAL3_3194
Auxiliary transport protein, MFP family, putative; [M] COG0845 Membrane-fusion protein.
 
 0.712
BBAL3_1405
Peptidase, C39 family; [V] COG2274 ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain.
  
 
 0.709
BBAL3_3246
Auxiliary transport protein, MFP family; [M] COG0845 Membrane-fusion protein.
  
 0.704
Your Current Organism:
Brevundimonas sp. BAL3
NCBI taxonomy Id: 391600
Other names: B. sp. BAL3
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