STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BBAL3_3208Type I secretion outer membrane protein, TolC family; [MU] COG1538 Outer membrane protein. (511 aa)    
Predicted Functional Partners:
BBAL3_1055
Auxiliary transport protein, MFP family, putative; [M] COG0845 Membrane-fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
  0.968
BBAL3_1788
Auxiliary transport protein, MFP family, putative; [M] COG0845 Membrane-fusion protein.
 
 0.960
BBAL3_798
Efflux transporter, RND family, MFP subunit; [M] COG0845 Membrane-fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
  0.955
BBAL3_2667
Efflux transporter, RND family, MFP subunit; [M] COG0845 Membrane-fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
  0.934
BBAL3_3194
Auxiliary transport protein, MFP family, putative; [M] COG0845 Membrane-fusion protein.
 
 0.923
BBAL3_1569
RND transporter, HAE1/HME family, permease protein; [V] COG0841 Cation/multidrug efflux pump; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 0.893
BBAL3_1828
Auxiliary transport protein, MFP family, putative; [M] COG0845 Membrane-fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.890
BBAL3_2087
Efflux transporter, RND family, MFP subunit; [M] COG0845 Membrane-fusion protein.
  
  0.885
BBAL3_479
Auxiliary transport protein, MFP family, putative; [V] COG1566 Multidrug resistance efflux pump.
 
 0.880
BBAL3_512
Auxiliary transport protein, MFP family, putative; [V] COG1566 Multidrug resistance efflux pump.
 
 0.870
Your Current Organism:
Brevundimonas sp. BAL3
NCBI taxonomy Id: 391600
Other names: B. sp. BAL3
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