STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BBAL3_3325acetyl-CoA acetyltransferases subfamily; [I] COG0183 Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. (391 aa)    
Predicted Functional Partners:
BBAL3_1109
3-hydroxyacyl-CoA dehydrogenase, C-terminal domain family; [I] COG1250 3-hydroxyacyl-CoA dehydrogenase.
 
 0.999
BBAL3_2265
3-hydroxyacyl-CoA dehydrogenase, C-terminal domain family; [I] COG1250 3-hydroxyacyl-CoA dehydrogenase.
 0.978
BBAL3_2814
3-hydroxyacyl-CoA dehydrogenase, C-terminal domain family; [I] COG1250 3-hydroxyacyl-CoA dehydrogenase.
 0.970
BBAL3_2598
[I] COG2057 Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit; overlaps another CDS with the same product name.
  
 
 0.914
BBAL3_1584
[C] COG0372 Citrate synthase; Belongs to the citrate synthase family.
  
 0.913
BBAL3_2754
Hypothetical protein; [C] COG0372 Citrate synthase.
  
 0.913
BBAL3_462
[I] COG1788 Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit; overlaps another CDS with the same product name.
  
 
 0.913
BBAL3_1345
HMGL-like, putative; [E] COG0119 Isopropylmalate/homocitrate/citramalate synthases.
  
 
 0.911
glcB
Malate synthase G; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl- CoA) and glyoxylate to form malate and CoA; Belongs to the malate synthase family. GlcB subfamily.
   
 
 0.909
BBAL3_183
HMGL-like domain protein; [E] COG0119 Isopropylmalate/homocitrate/citramalate synthases; Belongs to the alpha-IPM synthase/homocitrate synthase family.
  
 
 0.908
Your Current Organism:
Brevundimonas sp. BAL3
NCBI taxonomy Id: 391600
Other names: B. sp. BAL3
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