STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BBAL3_3358[K] COG1959 Predicted transcriptional regulator. (156 aa)    
Predicted Functional Partners:
BBAL3_1686
Aminotransferase, class V superfamily; [E] COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes.
  
 
 0.786
BBAL3_2157
Oxidoreductase, short chain dehydrogenase/reductase family; [R] COG0300 Short-chain dehydrogenases of various substrate specificities.
       0.695
BBAL3_1090
Hypothetical protein; [C] COG0822 NifU homolog involved in Fe-S cluster formation.
  
  
 0.581
BBAL3_1361
Hypothetical protein.
       0.513
BBAL3_2437
Flagellar motor switch protein FliG; FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation.
    
   0.479
BBAL3_156
Hypothetical protein; [C] COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases).
  
     0.460
BBAL3_899
[S] COG1729 Uncharacterized protein conserved in bacteria.
  
     0.439
BBAL3_1666
Hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
     0.430
BBAL3_719
[R] COG0790 FOG: TPR repeat, SEL1 subfamily.
  
     0.423
BBAL3_1784
Hypothetical protein; [C] COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases).
  
     0.420
Your Current Organism:
Brevundimonas sp. BAL3
NCBI taxonomy Id: 391600
Other names: B. sp. BAL3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.