STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BBAL3_3359TraG/TraD family; [U] COG3505 Type IV secretory pathway, VirD4 components. (512 aa)    
Predicted Functional Partners:
BBAL3_1594
P-type conjugative transfer ATPase TrbB; [U] COG4962 Flp pilus assembly protein, ATPase CpaF.
 
   
 0.950
BBAL3_2828
[S] COG1479 Uncharacterized conserved protein.
   
 
 0.912
BBAL3_3376
HNH endonuclease domain protein; [V] COG1403 Restriction endonuclease.
   
 
 0.912
BBAL3_3014
Bacterial conjugation TrbI-like protein; [U] COG2948 Type IV secretory pathway, VirB10 components.
 
 
 
 0.910
BBAL3_3024
Hypothetical protein; [U] COG3451 Type IV secretory pathway, VirB4 components.
 
  
 0.903
BBAL3_2009
Conjugal transfer protein TrbC; [U] COG3838 Type IV secretory pathway, VirB2 components (pilins).
 
   
 0.891
BBAL3_2415
Bacterial conjugation TrbI-like protein; [U] COG2948 Type IV secretory pathway, VirB10 components.
 
 
 
 0.888
BBAL3_273
P-type conjugative transfer protein TrbG, putative; [U] COG3504 Type IV secretory pathway, VirB9 components.
 
   
 0.874
BBAL3_924
Hypothetical protein; [NU] COG5268 Type IV secretory pathway, TrbD component.
 
     0.874
BBAL3_1016
Hypothetical protein; [U] COG5314 Conjugal transfer/entry exclusion protein.
 
   
 0.869
Your Current Organism:
Brevundimonas sp. BAL3
NCBI taxonomy Id: 391600
Other names: B. sp. BAL3
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.