STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BBAL3_412[GEPR] COG0477 Permeases of the major facilitator superfamily. (433 aa)    
Predicted Functional Partners:
BBAL3_2500
Hypothetical protein; [I] COG2030 Acyl dehydratase; MaoC like domain, putative.
       0.551
BBAL3_2575
HpcH/HpaI aldolase/citrate lyase family; [G] COG2301 Citrate lyase beta subunit; Belongs to the HpcH/HpaI aldolase family.
       0.551
BBAL3_897
Hypothetical protein; [C] COG0427 Acetyl-CoA hydrolase.
       0.551
BBAL3_2635
[P] COG1629 Outer membrane receptor proteins, mostly Fe transport.
 
     0.417
BBAL3_1085
[S] COG2898 Uncharacterized conserved protein.
     
 0.407
ispDF
2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, putative; Bifunctional enzyme that catalyzes the formation of 4- diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl-D- erythritol 4-phosphate (MEP) (IspD), and catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C- methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) (IspF).
      
 0.401
Your Current Organism:
Brevundimonas sp. BAL3
NCBI taxonomy Id: 391600
Other names: B. sp. BAL3
Server load: low (32%) [HD]