Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
BBAL3_449Conserved hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit. (231 aa)    
Predicted Functional Partners:
BBAL3_1795
[P] COG1629 Outer membrane receptor proteins, mostly Fe transport.
  
     0.629
BBAL3_2318
Ammonium transporter; [P] COG0004 Ammonia permease.
  
    0.591
BBAL3_2870
TonB-dependent receptor subfamily; [P] COG1629 Outer membrane receptor proteins, mostly Fe transport.
  
     0.519
BBAL3_3204
[P] COG1629 Outer membrane receptor proteins, mostly Fe transport.
  
     0.513
BBAL3_2635
[P] COG1629 Outer membrane receptor proteins, mostly Fe transport.
  
     0.488
BBAL3_54
[P] COG1629 Outer membrane receptor proteins, mostly Fe transport.
  
     0.476
BBAL3_519
TonB-dependent receptor plug domain protein; [P] COG1629 Outer membrane receptor proteins, mostly Fe transport.
  
     0.440
BBAL3_3395
TonB-dependent receptor subfamily; [P] COG1629 Outer membrane receptor proteins, mostly Fe transport.
  
     0.427
BBAL3_690
SapC superfamily; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
     0.415
Your Current Organism:
Brevundimonas sp. BAL3
NCBI taxonomy Id: 391600
Other names: B. sp. BAL3
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